All the works are performed by Sarah Kunath from U of Wisconsin-Madison under the guidance of Woonghee Lee.
Derivatives will be available soon as a Virtual Disk from NMRFAM Software Download web page.

Available from YouTube as a playlist.
Please check out our NMRFAM-SPARKY Video Tutorials, too.

1. Lee W, Petit CM, Cornilescu G, Stark JL, Markley JL. (2016) The AUDANA algorithm for automated protein 3D structure determination from NMR NOE data. Journal of Biomolecular NMR. in press
   
• AUDANA automation and/or PONDEROSA-X refinement
  
2. Lee W, Cornilescu G, Dashti H, Eghbalnia HR, Tonelli M, Westler WM, Butcher SE, Wildman-Henzler K, Markley JL. (2016) Integrative NMR for biomolecular research. Journal of Biomolecular NMR 64(4):307-332
   
• NMRFAM-SPARKY and/or Ponderosa Analyzer and/or Ponderosa Prediction Server and/or Video Tutorials
  
3. Lee W, Stark JL, Markley JL. (2014) PONDEROSA-C/S: Client-server based software package for automated protein 3D structure determination. Journal of Biomolecular NMR  60(2-3):73-5
• Any software related to the PONDEROSA-C/S package
4. Lee W, Kim JH, Westler WM, Markley JL (2011) PONDEROSA, an automated 3D-NOESY peak picking program, enables automated protein structure determination. Bioinformatics 27: 1727–1728
• PONDEROSA peak picking module (two-letter-code c3) in the NMRFAM-SPARKY

Last Updated: October 26, 2018